Browse of TCMCG051C43728 protein

CDS

Accession Number	TCMCG051C43728
gbkey	CDS
Protein Id	XP_024443508.1
Location	complement(join(6446375..6446767,6448084..6448242,6448403..6448505,6449315..6449395,6452648..6452724,6452815..6452886,6452993..6453069,6454109..6454169,6455201..6455298,6456335..6456442,6458090..6458379,6458476..6458541,6458721..6458800,6459669..6459829,6460374..6460405,6460523..6460683,6460886..6461050,6461170..6461234,6461627..6461755,6462134..6462240,6464072..6464195,6464650..6464728,6465166..6465231))
Gene	LOC18106204
GeneID	18106204
Organism	Populus trichocarpa

Protein

Length	917aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_024587740.1
Definition	tRNA ligase 1 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	atrnl,rnl
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000278        [VIEW IN EMBL-EBI] GO:0000281        [VIEW IN EMBL-EBI] GO:0000394        [VIEW IN EMBL-EBI] GO:0000910        [VIEW IN EMBL-EBI] GO:0003006        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003972        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006388        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006399        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008033        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008356        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0008452        [VIEW IN EMBL-EBI] GO:0009790        [VIEW IN EMBL-EBI] GO:0009791        [VIEW IN EMBL-EBI] GO:0009793        [VIEW IN EMBL-EBI] GO:0009966        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010069        [VIEW IN EMBL-EBI] GO:0010070        [VIEW IN EMBL-EBI] GO:0010154        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0010646        [VIEW IN EMBL-EBI] GO:0010928        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016874        [VIEW IN EMBL-EBI] GO:0016886        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0023051        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042245        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048316        [VIEW IN EMBL-EBI] GO:0048583        [VIEW IN EMBL-EBI] GO:0048608        [VIEW IN EMBL-EBI] GO:0048731        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051301        [VIEW IN EMBL-EBI] GO:0061458        [VIEW IN EMBL-EBI] GO:0061640        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTCAAGAGGCATGGGGAACTGCAGCTGGAAAGAAGCAAGTGGAGTTCAATGATTTTCTTGAGATAAACCGCATGTGCATATCAATGGAACTAGTTACTGCTGTTCTAGGAGACCATGGGCAACGCCCTCGAGAAGATTATGTGGTGGTGACGGCAGTCACAGAACTGGGCAATGGAAAGCCAAAGTTCTACTCAACTCCTGAAGTGATTGCCTTTTGTCGGAAATGGCGCCTTCCAACAAATCATGTTTGGTTGTTCTCAACAAGGAAATCAGTGACATCCTTTTTTGCGGCCTATGATGCATTGTGTGAGGAAGGATTGGCAACAACTGTATGTAGGGCTCTTGATGAAGTTGCTGATATATCTGTGCCAGGTTCAATAGACCATATAAAAGTGCAGGGTGAAATTTTGGAGGGTCTTGTGGCTCGTATTGTTGGTCATGAGAGCTCAAAGCACATGGAGGAGGTATTGAGAGAATATCCTCCTCCACCAGTTGAGGGAGCTGGCCTTGACCTGGGGCCAAGTCTAAGGGAAATCTGTGCTGCAAATAGGTCAGATGAAAAACAGCAAATAAAAGCCCTCCTTCAGAGTGTTGGCTCTTCATTTTGCCCTAACTTTTCAGACTGGTTTGGGGTTGAATCTGGTGATAGTCATTCAAAAAATGCCGACAGATCTGTTGTCTCAAAATTTTTACAAGCTCACCCTTCTGATTTTTCTACCACAAAGTTGCAGGAAATGATTCGTTTGATGAGAGAAAGGCGTTTACCAGCTGCTTTTAAATGCTATCATAACTTCCACAAAATCGGTTCTGTATCTGTTGACAATCTTTTCTATAAATTGGTCATTCATGTCCACAGTGACTCTGCTTTTCGGCGATATCAAAAAGAGATGAGGTACAAGCCGGGATTATGGCCATTATACCGAGGGTTTTTTGTTGACATTAACTTATTCAAGGCTAATAAGGAGAGAGCTGCTGAAATTGCAAAAAACAACAACATAGATGGAAATGTTAATGATAGAGCAAAAGATGGTTTAGCTGATGATGATGCAAATTTGATGATCAAACTGAAATTTCTTACATACAAGTTGAGAACCTTTTTGATCCGCAATGGCTTGTCAACTCTTTTCAAGGATGGCCCATCTGCCTACAAGGCATACTATCTAAGGCAGATGAAAATCTGGGGAACTTCAGCAGGAAAACAGCAAGAACTCAGCAAGATGCTAGATGAATGGGCTGTACACATACGAAGAAAATGTGGAAAGAAGCAGTTGTCATCTTCAATATACCTGACTGAGGCTGAATCTTTCCTTGAACAATACGCAAGTCGAAGTCCAGAGAACCAAGTTTTGATAGGATCTGCTGGAAGCTTTGTTAGGGCGGAAGATTTCATGGCCATCATAGAAGGAGGTAGGGACGAAGAGGGTGATCTTGAGATGGATAAGGAGGTGGTGTCCCCAAGTCCTATTTCCTCATTCAAGGAAACTGTTCAAAAGGATAAGGGTTTGATTGTCTTCTTTCCAGGAATTCCAGGATGCGCTAAGTCTGTACTTTGCAAGGAATTACTAAATGCCCCTGGAGGTCTTGGAGATGATCGCCCGGTTCATAGTTTGATGGGTGACCTTATTAAAGGAAAGTACTGGCAGAAGATTGCTGATGAGCGGCGGAAAAAACCATACTCTGTAATACTTGCAGACAAAAATGCACCCAATGAAGAGGTTTGGAGACAGATCGAAGGCATGTGCCGGAGCACCCAAGCCTCTGCTGTTCCGGTCATACCTGATTCAGAAGGGACGGATTCAAATCCATTTTCTCTTGATGCATTAGCTGTTTTCATGTTCCGTGTACTTCAACGTGTTAATCATCCGGGGAATTTGGACAAATCATCTCCAAATGCTGGTTTTGTGCTGCTTATGTTTTATCACCTTTATGATGGCAAGAACCGCACAGAGTTTGAGAGTGAACTAATAGAACGTTTTGGCTCTCTTGTCAAGATGCCATTGCTGAGACCAGATAGGAGTTCTCTGCCAGATCCAGTGAGATTGATTCTAGAAGAGGGGATAAATTTATACAGACTGCATACTAATGCACATGGAAGATTGGAATCCACCAAGGGTTCATATGGAAAGGAGTGGGTTAAGTGGGAGAAACAATTGCGTGAGGTTTTAATTGGTAGTGCTGAGCACCTGAATTCCATTCAGGTTCCATTTGAGTCTGCAGTAAAGCAAGTGTCAGAACAGCTACAGAATATCATCAAGGGAGAATACACTCCACCGAGCACAGAGATGAGGAAACTTGGCACAATTATTTTTGCTGCTGTCAGTTTGCCTGCTACAGAAATCTCCAGTCTCCTAGATAAGTTGGTTGAGAACAACCCCAAGGTCAAAAGCTTTCTCAAGGACAAGGACATGGAACACAACTTGAAGAAGGCTCATCTCACTCTTGCCCACAAGCGAAGTCATGGCGTTACGGCTGTAGCTAGATATGGGCATTTACTCCATCAGAAGGTCCCTGTGGAATTGACTGCCCTTCTTTTCACTGATGAAATGGCTGCTCTAGAAGCGGAAGTTGGTTCTGTTGATGGCGAAAAAGTTATACCCAAAAATGAGTGGCCGCATGTTACCTTATGGACTGGAGAGAAAATTGCGGCCAAGGAGGCGAACAGATTGCCTCAATTGCTTCTGGAGGGGAAAGCAATTCGTATTGAAATCAATCCACCCATCATCATATCTGGTGAACTAGAATTTTATTGA

Protein:   MFQEAWGTAAGKKQVEFNDFLEINRMCISMELVTAVLGDHGQRPREDYVVVTAVTELGNGKPKFYSTPEVIAFCRKWRLPTNHVWLFSTRKSVTSFFAAYDALCEEGLATTVCRALDEVADISVPGSIDHIKVQGEILEGLVARIVGHESSKHMEEVLREYPPPPVEGAGLDLGPSLREICAANRSDEKQQIKALLQSVGSSFCPNFSDWFGVESGDSHSKNADRSVVSKFLQAHPSDFSTTKLQEMIRLMRERRLPAAFKCYHNFHKIGSVSVDNLFYKLVIHVHSDSAFRRYQKEMRYKPGLWPLYRGFFVDINLFKANKERAAEIAKNNNIDGNVNDRAKDGLADDDANLMIKLKFLTYKLRTFLIRNGLSTLFKDGPSAYKAYYLRQMKIWGTSAGKQQELSKMLDEWAVHIRRKCGKKQLSSSIYLTEAESFLEQYASRSPENQVLIGSAGSFVRAEDFMAIIEGGRDEEGDLEMDKEVVSPSPISSFKETVQKDKGLIVFFPGIPGCAKSVLCKELLNAPGGLGDDRPVHSLMGDLIKGKYWQKIADERRKKPYSVILADKNAPNEEVWRQIEGMCRSTQASAVPVIPDSEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKSSPNAGFVLLMFYHLYDGKNRTEFESELIERFGSLVKMPLLRPDRSSLPDPVRLILEEGINLYRLHTNAHGRLESTKGSYGKEWVKWEKQLREVLIGSAEHLNSIQVPFESAVKQVSEQLQNIIKGEYTPPSTEMRKLGTIIFAAVSLPATEISSLLDKLVENNPKVKSFLKDKDMEHNLKKAHLTLAHKRSHGVTAVARYGHLLHQKVPVELTALLFTDEMAALEAEVGSVDGEKVIPKNEWPHVTLWTGEKIAAKEANRLPQLLLEGKAIRIEINPPIIISGELEFY